| 2011 |
Trabalho em evento |
Evidences of positive selection in metazoan genes for essential amino acid pathways
Igor Rodrigues Da COSTA; José Miguel ORTEGA; Francisco Prosdocimi De Castro SANTOS
X-meeting 2011 -- Brazilian International Conference in Bioinformatics
|
LS
Genetics
|
| 2011 |
Artigo em periódico |
The complete mitochondrial genome of two recently derived species of the fish genus Nannoperca (Perciformes; Percichthyidae)
Francisco Prosdocimi De Castro SANTOS; Carvalho Daniel CARDOSO; Almeida Renan NASCIMENTO; Beheregaray Luciano B
Molecular Biology Reports
DOI 10.1007/s11033-011-1034-5
ISSN 0301-4851
|
LS
Molecular Biology
|
| 2011 |
Artigo em periódico |
Spinning Gland Transcriptomics from Two Main Clades of Spiders (Order: Araneae) - Insights on Their Molecular; Anatomical and Behavioral Evolution
Francisco Prosdocimi De Castro SANTOS; Bittencourt DANIELA; Da Silva Felipe RODRIGUES; Kirst MATIAS; Motta Paulo C et al
Plos One
DOI 10.1371/journal.pone.0021634
ISSN 1932-6203
|
LS
Molecular Biology
|
| 2011 |
Artigo em periódico |
Sequence variations of Env signal peptide alleles in different clinical stages of HIV infection
Silva Joaquim Xavier DA; Franco Octávio LUIZ; Lemos Mikael Araújo GUIMARÃES; Gondim Marcos Vinícius PEREIRA; Francisco Prosdocimi De Castro SANTOS et al
Peptides (New York; N.Y. 1980)
DOI 10.1016/j.peptides.2011.07.014
ISSN 0196-9781
|
HS
Infectious Diseases
|
| 2011 |
Artigo em periódico |
Amino acids biosynthesis and nitrogen assimilation pathways: a great genomic deletion during eukaryotes evolution
Guedes RLM; Francisco Prosdocimi De Castro SANTOS; Fernandes GR; Moura LK; Ribeiro HAL et al
BMC Genomics
DOI 10.1186/1471-2164-12-S4-S2
ISSN 1471-2164
|
LS
Genetics
|
| 2011 |
Artigo em periódico |
EvoluCode: Evolutionary Barcodes as a Unifying Framework for Multilevel Evolutionary Data
Benjamin LINARD; Ngoc Hoan NGUYEN; Francisco Prosdocimi De Castro SANTOS; Olivier POCH; THOMPSON
Evolutionary Bioinformatics Online
DOI 10.4137/EBO.S8814
ISSN 1176-9343
|
LS
Ecology; Evolution; Behavior and Systematics
|
| 2010 |
Trabalho em evento |
MOLECULAR; BEHAVIORAL AND ANATOMICAL SOPHISTICATION IN SPIDER WEBS: INSIGHTS FROM SPINNING GLAND RNA-SEQ EXPERIMENTS IN PRIMITIVE AND MODERN SPIDERS
Francisco Prosdocimi De Castro SANTOS; Daniela BITTENCOURT; Felipe Rodrigues Da SILVA; Paulo Cesar MOTTA; Elibio Leopoldo RECH
Anais do VI X-meeting
|
LS
Animal Science and Zoology
|
| 2010 |
Trabalho em evento |
Next-generation sequencing analysis of two spider transcriptomes
Francisco Prosdocimi De Castro SANTOS; Daniela BITTENCOURT; Felipe Rodrigues Da SILVA; Matias KIRST; Paulo Cesar MOTTA et al
XXXIX Reunião Anual da SBBq
|
LS
Ecology; Evolution; Behavior and Systematics
|
| 2010 |
Artigo em periódico |
Survey of genome organization and gene content of Corynebacterium pseudotuberculosis
Vivian D AFONSECA; Francisco Prosdocimi De Castro SANTOS; Izabella PENA; Fernanda A DORELLA; Luis Gustavo C PACHECO et al
Microbiological Research
DOI 10.1016/j.micres.2009.05.009
ISSN 0944-5013
|
LS
Microbiology
|
| 2009 |
Capítulo de livro |
Knowledge standardization in evolutionary biology: the Comparative Data Analysis Ontology (CDAO)
Francisco Prosdocimi De Castro SANTOS; Brandon CHISHAM; Enrico PONTELLI; Arlin STOLTZFUS; Julie THOMPSON
Evolutionary Biology: concept; modeling and application
ISBN 3642009514
|
LS
Ecology; Evolution; Behavior and Systematics
|
| 2009 |
Capítulo de livro |
Meeting Report: 12th Evolutionary Biology in Marseilles
Francisco Prosdocimi De Castro SANTOS; Pierre PONTAROTTI
Evolutionary Biology: concept; modeling and application
ISBN 3642009514
|
LS
Ecology; Evolution; Behavior and Systematics
|
| 2009 |
Trabalho em evento |
CDAO: a semantic web-ontology language to represent evolutionary biology data and analysis.
Francisco Prosdocimi De Castro SANTOS; Brandon CHISHAM; Enrico PONTELLI; Julie THOMPSON; Arlin STOLTZFUS
V X-meeting 2009
|
LS
Ecology; Evolution; Behavior and Systematics
|
| 2009 |
Artigo em periódico |
Initial Implementation of a comparative Data Analysis Ontology
Francisco Prosdocimi De Castro SANTOS; Brandon CHISHAM; Enrico PONTELLI; Julie THOMPSON; Arlin STOLTZFUS
Evolutionary Bioinformatics Online
ISSN 1176-9343
|
LS
Biochemistry; Genetics and Molecular Biology (miscellaneous)
|
| 2008 |
Trabalho em evento |
CDAO: an evolutionary framework for comparative data analysis
Francisco Prosdocimi De Castro SANTOS; Brandon CHISHAM; Enrico PONTELLI; Julie THOMPSON; Arlin STOLTZFUS
Data Integration in Life Sciences (DILS) 2008
|
PS
Computer Science Applications
|
| 2008 |
Trabalho em evento |
Clustering of Synthetic Homologs using Seed Linkage
Lucas S SANTOS; Francisco Prosdocimi De Castro SANTOS; Adriano Barbosa SILVA; José Miguel ORTEGA
XXXVII Reunião Anual da SBBq
|
PS
Computer Vision and Pattern Recognition
|
| 2008 |
Trabalho em evento |
Enrichment of COG Database with 905355 sequences from 3414 genomes
Gabriel FERNANDES; Daniela BARBOSA; Francisco Prosdocimi De Castro SANTOS; Izabella PENA; Lucas S SANTOS et al
16th Annual International Conference Intelligent Systems for Molecular Biology
|
LS
Molecular Biology
|
| 2008 |
Artigo em periódico |
Essential amino acid usage and evolutionary nutrigenomics of eukaryotes - insights into the differential usage of amino acids in protein domains and extra-domains
Santana Santos L; Francisco Prosdocimi De Castro SANTOS; Ortega J M
Genetics and Molecular Research
DOI 10.4238/vol7-3X-Meeting002
ISSN 1676-5680
|
LS
Genetics
|
| 2008 |
Artigo em periódico |
A procedure to recruit members to enlarge protein family databases - the building of UECOG (UniRef-Enriched COG Database) as a model
Fernandes G R; Barbosa D V C; Francisco Prosdocimi De Castro SANTOS; Pena I A; Santana Santos L et al
Genetics and Molecular Research
DOI 10.4238/vol7-3X-Meeting008
ISSN 1676-5680
|
LS
Genetics
|
| 2007 |
Trabalho em evento |
Human and fly protein-coding genes contain more stop resistant codons than random nucleotide sequences
Francisco Prosdocimi De Castro SANTOS; José Miguel ORTEGA
SBBq
|
LS
Genetics
|
| 2007 |
Trabalho em evento |
About a preference for stop-resistant codons in eukaryotic genomes
Francisco Prosdocimi De Castro SANTOS; José Miguel ORTEGA
Brazilian Symposium on Bioinformatics
|
LS
Genetics
|
| 2007 |
Trabalho em evento |
The codon usage of Leucine; Serine and Arginine reveals evolutionary stability of proteomes and protein-coding genes
Francisco Prosdocimi De Castro SANTOS; José Miguel ORTEGA
Brazilian Symposium on Bioinformatics
|
LS
Genetics
|
| 2007 |
Trabalho em evento |
Essential amino acid usage and evolutionary nutrigenomics of eukaryotes
Lucas S SANTOS; Francisco Prosdocimi De Castro SANTOS; José Miguel ORTEGA
3rd X-meeting -- International Conference of the Brazilian Association for Bioinformatics and Computacional Biology
|
LS
Biochemistry; Genetics and Molecular Biology (miscellaneous)
|
| 2007 |
Trabalho em evento |
Ortholog-specific PSSM matrices improves the annotation of Corynebacterium genomes
Francisco Prosdocimi De Castro SANTOS; Izabella PENA; José Miguel ORTEGA
3rd X-meeting -- International Conference of the Brazilian Association for Bioinformatics and Computacional Biology
|
LS
Molecular Biology
|
| 2007 |
Trabalho em evento |
Favorable occurrence of beta string but not alpha helix in evolving proteins
Oto Coelho JÚNIOR; Francisco Prosdocimi De Castro SANTOS; José Miguel ORTEGA
3rd X-meeting -- International Conference of the Brazilian Association for Bioinformatics and Computacional Biology
|
LS
Molecular Biology
|
| 2007 |
Trabalho em evento |
UECOG - Uniprot Enriched COG database
Daniela BARBOSA; Gabriel FERNANDES; Francisco Prosdocimi De Castro SANTOS; Izabella PENA; Lucas S SANTOS et al
3rd X-meeting -- International Conference of the Brazilian Association for Bioinformatics and Computacional Biology
|
LS
Molecular Biology
|